Carnation DB

Dca48553.1

Annotation

5-exons
f-1
sp|Q9XEX8_SOLLC#Remorin 1#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=rem-1#unknown#0F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48553.1	1	184	184	61.95	184	57	2e-46
Target_name	Start	End	Length	Cov(%)
sp\|Q9XEX8_SOLLC	1	197	197	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48553.1	19	184	184	51.63	166	58	6e-43
Target_name	Start	End	Length	Cov(%)
AT3G48940.1	12	175	175	93.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	304880	307503	.	-	.	ID=Dca48553.1;Parent=Dca48553
scaffold6	Augus-PASA	exon	304880	305074	.	-	.	ID=Dca48553.1.exon1;Parent=Dca48553.1
scaffold6	Augus-PASA	exon	305242	305323	.	-	.	ID=Dca48553.1.exon2;Parent=Dca48553.1
scaffold6	Augus-PASA	exon	305722	305809	.	-	.	ID=Dca48553.1.exon3;Parent=Dca48553.1
scaffold6	Augus-PASA	exon	305905	305952	.	-	.	ID=Dca48553.1.exon4;Parent=Dca48553.1
scaffold6	Augus-PASA	exon	307362	307503	.	-	.	ID=Dca48553.1.exon5;Parent=Dca48553.1