Carnation DB

Dca48574.1

Annotation

6-exons
f-1
sp|E0CQ43_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14100#unknown#0F0P0C
AT5G42560.1 | Symbols: | Abscisic acid-responsive (TB2/DP1, HVA22) family protein | chr5:17015573-17016969 FORWARD LENGTH=296
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48574.1	1	303	303	61.71	303	61	1e-92
Target_name	Start	End	Length	Cov(%)
sp\|E0CQ43_VITVI	1	288	288	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48574.1	1	303	303	55.11	303	54	4e-80
Target_name	Start	End	Length	Cov(%)
AT5G42560.1	1	296	296	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	483552	485253	.	+	.	ID=Dca48574.1;Parent=Dca48574
scaffold6	Augustus	exon	483552	483583	.	+	.	ID=Dca48574.1.exon1;Parent=Dca48574.1
scaffold6	Augus-PASA	exon	483678	483776	.	+	.	ID=Dca48574.1.exon2;Parent=Dca48574.1
scaffold6	Augus-PASA	exon	483892	483948	.	+	.	ID=Dca48574.1.exon3;Parent=Dca48574.1
scaffold6	Augus-PASA	exon	484039	484102	.	+	.	ID=Dca48574.1.exon4;Parent=Dca48574.1
scaffold6	Augus-PASA	exon	484211	484420	.	+	.	ID=Dca48574.1.exon5;Parent=Dca48574.1
scaffold6	Augus-PASA	exon	484804	485253	.	+	.	ID=Dca48574.1.exon6;Parent=Dca48574.1