Carnation DB

Dca48575.1

Annotation

5-exons
f-1
sp|B9R876_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1597430#GO:0031072;GO:0051082#2F0P0C
AT1G75690.1 | Symbols: | DnaJ/Hsp40 cysteine-rich domain superfamily protein | chr1:28422273-28423170 REVERSE LENGTH=154
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48575.1	44	165	165	63.63	122	86	2e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9R876_RICCO	34	156	156	78.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48575.1	42	165	165	61.81	124	80	8e-57
Target_name	Start	End	Length	Cov(%)
AT1G75690.1	27	154	154	83.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	485868	487566	.	+	.	ID=Dca48575.1;Parent=Dca48575
scaffold6	Augus-PASA	exon	485868	486050	.	+	.	ID=Dca48575.1.exon1;Parent=Dca48575.1
scaffold6	Augus-PASA	exon	486329	486412	.	+	.	ID=Dca48575.1.exon2;Parent=Dca48575.1
scaffold6	Augus-PASA	exon	486509	486560	.	+	.	ID=Dca48575.1.exon3;Parent=Dca48575.1
scaffold6	Augus-PASA	exon	487225	487381	.	+	.	ID=Dca48575.1.exon4;Parent=Dca48575.1
scaffold6	Augus-PASA	exon	487545	487566	.	+	.	ID=Dca48575.1.exon5;Parent=Dca48575.1