Carnation DB

Dca48580.1

Annotation

21-exons
f-1
sp|F6I6X8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g00260#GO:0005488#1F0P0C
Os10t0548200-01 Tetratricopeptide-like helical domain containing protein.
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48580.1	4	1138	1138	56.41	1135	55	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I6X8_VITVI	52	1217	1217	95.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48580.1	16	1138	1138	52.19	1123	52	0
Target_name	Start	End	Length	Cov(%)
AT1G76630.2	6	1164	1168	99.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	523761	532591	.	-	.	ID=Dca48580.1;Parent=Dca48580
scaffold6	Augustus	exon	523761	523933	.	-	.	ID=Dca48580.1.exon1;Parent=Dca48580.1
scaffold6	Augustus	exon	524407	524610	.	-	.	ID=Dca48580.1.exon2;Parent=Dca48580.1
scaffold6	Augustus	exon	524931	525568	.	-	.	ID=Dca48580.1.exon3;Parent=Dca48580.1
scaffold6	Augustus	exon	525874	526113	.	-	.	ID=Dca48580.1.exon4;Parent=Dca48580.1
scaffold6	Augustus	exon	526273	526367	.	-	.	ID=Dca48580.1.exon5;Parent=Dca48580.1
scaffold6	Augustus	exon	526477	526850	.	-	.	ID=Dca48580.1.exon6;Parent=Dca48580.1
scaffold6	Augustus	exon	527117	527168	.	-	.	ID=Dca48580.1.exon7;Parent=Dca48580.1
scaffold6	Augustus	exon	527621	527833	.	-	.	ID=Dca48580.1.exon8;Parent=Dca48580.1
scaffold6	Augustus	exon	527937	528002	.	-	.	ID=Dca48580.1.exon9;Parent=Dca48580.1
scaffold6	Augustus	exon	528242	528299	.	-	.	ID=Dca48580.1.exon10;Parent=Dca48580.1
scaffold6	Augustus	exon	528385	528500	.	-	.	ID=Dca48580.1.exon11;Parent=Dca48580.1
scaffold6	Augustus	exon	529052	529223	.	-	.	ID=Dca48580.1.exon12;Parent=Dca48580.1
scaffold6	Augustus	exon	529323	529561	.	-	.	ID=Dca48580.1.exon13;Parent=Dca48580.1
scaffold6	Augustus	exon	529814	529894	.	-	.	ID=Dca48580.1.exon14;Parent=Dca48580.1
scaffold6	Augustus	exon	529966	530106	.	-	.	ID=Dca48580.1.exon15;Parent=Dca48580.1
scaffold6	Augustus	exon	531365	531415	.	-	.	ID=Dca48580.1.exon16;Parent=Dca48580.1
scaffold6	Augustus	exon	531521	531604	.	-	.	ID=Dca48580.1.exon17;Parent=Dca48580.1
scaffold6	Augustus	exon	531698	531820	.	-	.	ID=Dca48580.1.exon18;Parent=Dca48580.1
scaffold6	Augustus	exon	532095	532292	.	-	.	ID=Dca48580.1.exon19;Parent=Dca48580.1
scaffold6	Augustus	exon	532412	532498	.	-	.	ID=Dca48580.1.exon20;Parent=Dca48580.1
scaffold6	Augustus	exon	532580	532591	.	-	.	ID=Dca48580.1.exon21;Parent=Dca48580.1