Carnation DB

Dca48588.1

Annotation

5-exons
f-3
sp|B9H5X9_POPTR#Light-harvesting complex II protein Lhcb7#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=Lhcb7#GO:0009507;GO:0016020;GO:0009765#0F1P2C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48588.1	1	275	277	75.81	275	77	1e-127
Target_name	Start	End	Length	Cov(%)
sp\|B9H5X9_POPTR	62	336	338	81.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48588.1	1	276	277	73.28	276	74	3e-124
Target_name	Start	End	Length	Cov(%)
AT1G76570.1	52	327	327	84.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	567544	570393	.	-	.	ID=Dca48588.1;Parent=Dca48588
scaffold6	Augus-PASA	exon	567544	567846	.	-	.	ID=Dca48588.1.exon1;Parent=Dca48588.1
scaffold6	Augus-PASA	exon	568831	568923	.	-	.	ID=Dca48588.1.exon2;Parent=Dca48588.1
scaffold6	Augus-PASA	exon	569233	569365	.	-	.	ID=Dca48588.1.exon3;Parent=Dca48588.1
scaffold6	Augustus	exon	569646	569792	.	-	.	ID=Dca48588.1.exon4;Parent=Dca48588.1
scaffold6	Augustus	exon	570234	570393	.	-	.	ID=Dca48588.1.exon5;Parent=Dca48588.1