Carnation DB

Dca48594.1

Annotation

6-exons
f-1
sp|D7UDF2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g00670#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|B9GPN7_POPTR#Chromatin remodeling complex subunit#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CHB903#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48594.1	8	477	482	52.48	470	53	2e-125
Target_name	Start	End	Length	Cov(%)
sp\|D7UDF2_VITVI	30	492	492	94.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48594.1	37	466	482	44.39	430	49	5e-108
Target_name	Start	End	Length	Cov(%)
AT2G33610.1	46	463	469	89.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	594418	597285	.	+	.	ID=Dca48594.1;Parent=Dca48594
scaffold6	Augustus	exon	594418	594553	.	+	.	ID=Dca48594.1.exon1;Parent=Dca48594.1
scaffold6	Augustus	exon	594652	595124	.	+	.	ID=Dca48594.1.exon2;Parent=Dca48594.1
scaffold6	Augustus	exon	596095	596466	.	+	.	ID=Dca48594.1.exon3;Parent=Dca48594.1
scaffold6	Augustus	exon	596554	596692	.	+	.	ID=Dca48594.1.exon4;Parent=Dca48594.1
scaffold6	Augustus	exon	596859	596989	.	+	.	ID=Dca48594.1.exon5;Parent=Dca48594.1
scaffold6	Augustus	exon	597088	597285	.	+	.	ID=Dca48594.1.exon6;Parent=Dca48594.1