Dca486.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold10086)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca486.1 |
17 |
107 |
485 |
9.69 |
91 |
52 |
1e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
766 |
856 |
1717 |
5.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca486.1 |
120 |
478 |
485 |
27.01 |
359 |
37 |
6e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
77 |
431 |
591 |
60.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10086 |
Augustus |
mRNA |
9418 |
11118 |
. |
+ |
. |
ID=Dca486.1;Parent=Dca486 |
| scaffold10086 |
Augustus |
exon |
9418 |
9736 |
. |
+ |
. |
ID=Dca486.1.exon1;Parent=Dca486.1 |
| scaffold10086 |
Augustus |
exon |
9832 |
9871 |
. |
+ |
. |
ID=Dca486.1.exon2;Parent=Dca486.1 |
| scaffold10086 |
Augustus |
exon |
10020 |
11118 |
. |
+ |
. |
ID=Dca486.1.exon3;Parent=Dca486.1 |
