Carnation DB

Dca48611.1

Annotation

6-exons
f-1
sp|C6SZ03_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#unknown#0F0P0C
AT1G42960.1 | Symbols: | expressed protein localized to the inner membrane of the chloroplast. | chr1:16125863-16127080 FORWARD LENGTH=168
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48611.1	49	150	289	28.37	102	81	2e-41
Target_name	Start	End	Length	Cov(%)
sp\|C6SZ03_SOYBN	48	146	163	60.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48611.1	52	150	289	25.25	99	74	4e-35
Target_name	Start	End	Length	Cov(%)
AT1G42960.1	56	151	168	57.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	710154	715288	.	+	.	ID=Dca48611.1;Parent=Dca48611
scaffold6	Augus-PASA	exon	710154	710214	.	+	.	ID=Dca48611.1.exon1;Parent=Dca48611.1
scaffold6	Augus-PASA	exon	712312	712426	.	+	.	ID=Dca48611.1.exon2;Parent=Dca48611.1
scaffold6	Augus-PASA	exon	712759	712855	.	+	.	ID=Dca48611.1.exon3;Parent=Dca48611.1
scaffold6	Augus-PASA	exon	713162	713257	.	+	.	ID=Dca48611.1.exon4;Parent=Dca48611.1
scaffold6	Augustus	exon	713331	713412	.	+	.	ID=Dca48611.1.exon5;Parent=Dca48611.1
scaffold6	Augustus	exon	714870	715288	.	+	.	ID=Dca48611.1.exon6;Parent=Dca48611.1