Carnation DB

Dca48621.1

Annotation

21-exons
f-697
sp|F6I6T9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0122g01130#GO:0005524;GO:0004003;GO:0003677#3F0P0C
sp|B9R8Q0_RICCO#Brca1 interacting protein helicase 1 brip1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1601590#GO:0005524;GO:0004003;GO:0003677#3F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48621.1	7	189	189	64.55	183	63	4e-62
Target_name	Start	End	Length	Cov(%)
sp\|B9P762_POPTR	8	194	339	55.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48621.1	20	189	189	62.96	170	64	4e-60
Target_name	Start	End	Length	Cov(%)
AT1G20720.1	23	201	1175	15.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	780899	793438	.	+	.	ID=Dca48621.1;Parent=Dca48621
scaffold6	Augustus	exon	780899	781250	.	+	.	ID=Dca48621.1.exon1;Parent=Dca48621.1
scaffold6	Augustus	exon	782380	782455	.	+	.	ID=Dca48621.1.exon2;Parent=Dca48621.1
scaffold6	Augustus	exon	782582	782657	.	+	.	ID=Dca48621.1.exon3;Parent=Dca48621.1
scaffold6	Augustus	exon	783021	783085	.	+	.	ID=Dca48621.1.exon4;Parent=Dca48621.1
scaffold6	Augustus	exon	783313	783413	.	+	.	ID=Dca48621.1.exon5;Parent=Dca48621.1
scaffold6	Augustus	exon	783525	783666	.	+	.	ID=Dca48621.1.exon6;Parent=Dca48621.1
scaffold6	Augustus	exon	784362	784423	.	+	.	ID=Dca48621.1.exon7;Parent=Dca48621.1
scaffold6	Augustus	exon	785775	785845	.	+	.	ID=Dca48621.1.exon8;Parent=Dca48621.1
scaffold6	Augustus	exon	785916	785991	.	+	.	ID=Dca48621.1.exon9;Parent=Dca48621.1
scaffold6	Augustus	exon	786808	786916	.	+	.	ID=Dca48621.1.exon10;Parent=Dca48621.1
scaffold6	Augustus	exon	787381	787474	.	+	.	ID=Dca48621.1.exon11;Parent=Dca48621.1
scaffold6	Augustus	exon	787569	787652	.	+	.	ID=Dca48621.1.exon12;Parent=Dca48621.1
scaffold6	Augustus	exon	787748	787904	.	+	.	ID=Dca48621.1.exon13;Parent=Dca48621.1
scaffold6	Augustus	exon	788068	788255	.	+	.	ID=Dca48621.1.exon14;Parent=Dca48621.1
scaffold6	Augustus	exon	788953	788981	.	+	.	ID=Dca48621.1.exon15;Parent=Dca48621.1
scaffold6	Augustus	exon	789067	789188	.	+	.	ID=Dca48621.1.exon16;Parent=Dca48621.1
scaffold6	Augustus	exon	790795	791350	.	+	.	ID=Dca48621.1.exon17;Parent=Dca48621.1
scaffold6	Augustus	exon	791718	792645	.	+	.	ID=Dca48621.1.exon18;Parent=Dca48621.1
scaffold6	Augustus	exon	792741	792797	.	+	.	ID=Dca48621.1.exon19;Parent=Dca48621.1
scaffold6	Augustus	exon	792911	793030	.	+	.	ID=Dca48621.1.exon20;Parent=Dca48621.1
scaffold6	Augustus	exon	793235	793438	.	+	.	ID=Dca48621.1.exon21;Parent=Dca48621.1