Carnation DB

Dca48624.1

Annotation

19-exons
f-1
sp|A5APM6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009389#GO:0016021;GO:0008158#1F0P1C
AT1G42470.1 | Symbols: | Patched family protein | chr1:15926987-15935128 FORWARD LENGTH=1272
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48624.1	44	811	827	60.45	768	61	0
Target_name	Start	End	Length	Cov(%)
sp\|A5APM6_VITVI	1	789	1050	75.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48624.1	735	805	827	6.04	71	71	3e-26
Target_name	Start	End	Length	Cov(%)
AT1G42470.1	875	945	1272	5.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	831548	845825	.	+	.	ID=Dca48624.1;Parent=Dca48624
scaffold6	Augustus	exon	831548	831648	.	+	.	ID=Dca48624.1.exon1;Parent=Dca48624.1
scaffold6	Augustus	exon	834959	835058	.	+	.	ID=Dca48624.1.exon2;Parent=Dca48624.1
scaffold6	Augustus	exon	835180	835287	.	+	.	ID=Dca48624.1.exon3;Parent=Dca48624.1
scaffold6	Augustus	exon	835879	835995	.	+	.	ID=Dca48624.1.exon4;Parent=Dca48624.1
scaffold6	Augustus	exon	836670	836820	.	+	.	ID=Dca48624.1.exon5;Parent=Dca48624.1
scaffold6	Augustus	exon	837311	837558	.	+	.	ID=Dca48624.1.exon6;Parent=Dca48624.1
scaffold6	Augustus	exon	837643	837825	.	+	.	ID=Dca48624.1.exon7;Parent=Dca48624.1
scaffold6	Augustus	exon	838305	838381	.	+	.	ID=Dca48624.1.exon8;Parent=Dca48624.1
scaffold6	Augustus	exon	838467	838584	.	+	.	ID=Dca48624.1.exon9;Parent=Dca48624.1
scaffold6	Augustus	exon	839000	839083	.	+	.	ID=Dca48624.1.exon10;Parent=Dca48624.1
scaffold6	Augustus	exon	839480	839581	.	+	.	ID=Dca48624.1.exon11;Parent=Dca48624.1
scaffold6	Augustus	exon	840162	840257	.	+	.	ID=Dca48624.1.exon12;Parent=Dca48624.1
scaffold6	Augustus	exon	840337	840444	.	+	.	ID=Dca48624.1.exon13;Parent=Dca48624.1
scaffold6	Augustus	exon	841395	841508	.	+	.	ID=Dca48624.1.exon14;Parent=Dca48624.1
scaffold6	Augustus	exon	842360	842488	.	+	.	ID=Dca48624.1.exon15;Parent=Dca48624.1
scaffold6	Augustus	exon	843084	843282	.	+	.	ID=Dca48624.1.exon16;Parent=Dca48624.1
scaffold6	Augustus	exon	843400	843540	.	+	.	ID=Dca48624.1.exon17;Parent=Dca48624.1
scaffold6	Augustus	exon	845352	845458	.	+	.	ID=Dca48624.1.exon18;Parent=Dca48624.1
scaffold6	Augustus	exon	845625	845825	.	+	.	ID=Dca48624.1.exon19;Parent=Dca48624.1