Carnation DB

Dca48629.1

Annotation

6-exons
f-1
sp|E0CQR2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g00060#GO:0003844;GO:0043169;GO:0004553;GO:0005978#3F1P0C
Os06t0726400-04 Similar to 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic.
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48629.1	21	550	550	74.72	530	77	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CQR2_VITVI	20	555	840	63.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48629.1	48	549	550	67.63	502	75	0
Target_name	Start	End	Length	Cov(%)
Os06t0726400-04	4	490	777	62.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	884667	887351	.	+	.	ID=Dca48629.1;Parent=Dca48629
scaffold6	Augustus	exon	884667	884750	.	+	.	ID=Dca48629.1.exon1;Parent=Dca48629.1
scaffold6	Augus-PASA	exon	885430	885534	.	+	.	ID=Dca48629.1.exon2;Parent=Dca48629.1
scaffold6	Augus-PASA	exon	885619	885829	.	+	.	ID=Dca48629.1.exon3;Parent=Dca48629.1
scaffold6	Augus-PASA	exon	885915	885984	.	+	.	ID=Dca48629.1.exon4;Parent=Dca48629.1
scaffold6	Augus-PASA	exon	886081	886350	.	+	.	ID=Dca48629.1.exon5;Parent=Dca48629.1
scaffold6	Augus-PASA	exon	886439	887351	.	+	.	ID=Dca48629.1.exon6;Parent=Dca48629.1