Carnation DB

Dca48631.1

Annotation

6-exons
f-1
sp|F6HIX6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0047g01240#unknown#0F0P0C
Os08t0564800-01 Coactivator CBP, KIX domain containing protein.
Repeat List (scaffold60)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48631.1	68	162	201	28.85	95	60	1e-25
Target_name	Start	End	Length	Cov(%)
sp\|F6HIX6_VITVI	340	437	1187	8.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48631.1	69	163	201	25.37	95	53	2e-21
Target_name	Start	End	Length	Cov(%)
AT1G15780.1	571	667	1335	7.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold60	Augustus	mRNA	11385	13426	.	+	.	ID=Dca48631.1;Parent=Dca48631
scaffold60	Augustus	exon	11385	11607	.	+	.	ID=Dca48631.1.exon1;Parent=Dca48631.1
scaffold60	Augustus	exon	11819	11889	.	+	.	ID=Dca48631.1.exon2;Parent=Dca48631.1
scaffold60	Augustus	exon	12014	12088	.	+	.	ID=Dca48631.1.exon3;Parent=Dca48631.1
scaffold60	Augustus	exon	12594	12710	.	+	.	ID=Dca48631.1.exon4;Parent=Dca48631.1
scaffold60	Augustus	exon	12870	12963	.	+	.	ID=Dca48631.1.exon5;Parent=Dca48631.1
scaffold60	Augustus	exon	13401	13426	.	+	.	ID=Dca48631.1.exon6;Parent=Dca48631.1