Dca48634.1
Annotation
- 3-exons
- f-1
- sp|E0CSG3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02230#GO:0005840;GO:0003723;GO:0003735;GO:0006412#2F1P1C
- sp|B9T1X1_RICCO#30S ribosomal protein S20, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0108620#GO:0005840;GO:0003723;GO:0003735;GO:0006412#2F1P1C
- Repeat List (scaffold60)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48634.1 |
11 |
183 |
185 |
59.45 |
173 |
64 |
1e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E0CSG3_VITVI |
9 |
182 |
183 |
95.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48634.1 |
60 |
178 |
185 |
44.32 |
119 |
69 |
7e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G15190.1 |
68 |
187 |
202 |
59.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold60 |
Augustus |
mRNA |
37972 |
40796 |
. |
- |
. |
ID=Dca48634.1;Parent=Dca48634 |
| scaffold60 |
Augustus |
exon |
37972 |
38205 |
. |
- |
. |
ID=Dca48634.1.exon1;Parent=Dca48634.1 |
| scaffold60 |
Augustus |
exon |
38589 |
38755 |
. |
- |
. |
ID=Dca48634.1.exon2;Parent=Dca48634.1 |
| scaffold60 |
Augustus |
exon |
40640 |
40796 |
. |
- |
. |
ID=Dca48634.1.exon3;Parent=Dca48634.1 |
