Carnation DB

Dca48648.1

Annotation

5-exons
f-1
sp|E5GBF8_CUCME#RNA exonuclease#Cucumis melo subsp melo#unknown#GO:0005622;GO:0004527;GO:0003676#2F0P1C
Repeat List (scaffold60)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48648.1	11	140	140	59.28	130	61	2e-36
Target_name	Start	End	Length	Cov(%)
sp\|E5GBF8_CUCME	4	130	265	47.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48648.1	21	140	140	54.28	120	63	3e-31
Target_name	Start	End	Length	Cov(%)
AT3G15080.1	20	133	275	41.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold60	Augustus	mRNA	176109	178550	.	-	.	ID=Dca48648.1;Parent=Dca48648
scaffold60	Augustus	exon	176109	176192	.	-	.	ID=Dca48648.1.exon1;Parent=Dca48648.1
scaffold60	Augustus	exon	176988	177072	.	-	.	ID=Dca48648.1.exon2;Parent=Dca48648.1
scaffold60	Augustus	exon	178060	178141	.	-	.	ID=Dca48648.1.exon3;Parent=Dca48648.1
scaffold60	Augustus	exon	178248	178329	.	-	.	ID=Dca48648.1.exon4;Parent=Dca48648.1
scaffold60	Augustus	exon	178461	178550	.	-	.	ID=Dca48648.1.exon5;Parent=Dca48648.1