Carnation DB

Dca48649.1

Annotation

5-exons
f-1
sp|B9RXA6_RICCO#Ring finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1743330#GO:0008270#1F0P0C
Repeat List (scaffold60)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48649.1	1	549	550	47.63	549	47	6e-121
Target_name	Start	End	Length	Cov(%)
sp\|B9RXA6_RICCO	1	548	549	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48649.1	29	547	550	34.54	519	35	2e-59
Target_name	Start	End	Length	Cov(%)
AT1G53190.1	24	491	494	94.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold60	Augus-PASA	mRNA	188920	192672	.	+	.	ID=Dca48649.1;Parent=Dca48649
scaffold60	Augus-PASA	exon	188920	189769	.	+	.	ID=Dca48649.1.exon1;Parent=Dca48649.1
scaffold60	Augus-PASA	exon	190505	190887	.	+	.	ID=Dca48649.1.exon2;Parent=Dca48649.1
scaffold60	Augus-PASA	exon	191492	191596	.	+	.	ID=Dca48649.1.exon3;Parent=Dca48649.1
scaffold60	Augus-PASA	exon	191707	191874	.	+	.	ID=Dca48649.1.exon4;Parent=Dca48649.1
scaffold60	Augus-PASA	exon	192526	192672	.	+	.	ID=Dca48649.1.exon5;Parent=Dca48649.1