Dca4865.1
Annotation
- 2-exons
- f-1
- sp|Q8LNK3_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0071I20.15#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold11849)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4865.1 |
1 |
324 |
344 |
67.15 |
324 |
62 |
7e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8LNK3_ORYSJ |
414 |
789 |
1140 |
32.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4865.1 |
8 |
325 |
344 |
43.89 |
318 |
38 |
1e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
605 |
998 |
1539 |
25.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11849 |
Augustus |
mRNA |
2629 |
3813 |
. |
+ |
. |
ID=Dca4865.1;Parent=Dca4865 |
| scaffold11849 |
Augustus |
exon |
2629 |
3152 |
. |
+ |
. |
ID=Dca4865.1.exon1;Parent=Dca4865.1 |
| scaffold11849 |
Augustus |
exon |
3303 |
3813 |
. |
+ |
. |
ID=Dca4865.1.exon2;Parent=Dca4865.1 |
