Carnation DB

Dca48657.1

Annotation

7-exons
f-1
sp|B9I1V3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568822#GO:0005488;GO:0045454#1F1P0C
AT1G53300.1 | Symbols: TTL1 | tetratricopetide-repeat thioredoxin-like 1 | chr1:19879726-19882375 FORWARD LENGTH=699
Repeat List (scaffold60)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48657.1	3	733	733	60.3	731	59	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I1V3_POPTR	14	698	698	98.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48657.1	120	732	733	48.15	613	58	0
Target_name	Start	End	Length	Cov(%)
AT1G53300.1	136	698	699	80.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold60	Augus-PASA	mRNA	267761	271219	.	-	.	ID=Dca48657.1;Parent=Dca48657
scaffold60	Augus-PASA	exon	267761	267913	.	-	.	ID=Dca48657.1.exon1;Parent=Dca48657.1
scaffold60	Augus-PASA	exon	267995	268101	.	-	.	ID=Dca48657.1.exon2;Parent=Dca48657.1
scaffold60	Augustus	exon	268197	268401	.	-	.	ID=Dca48657.1.exon3;Parent=Dca48657.1
scaffold60	Augustus	exon	268498	268831	.	-	.	ID=Dca48657.1.exon4;Parent=Dca48657.1
scaffold60	Augustus	exon	268916	269106	.	-	.	ID=Dca48657.1.exon5;Parent=Dca48657.1
scaffold60	Augustus	exon	269187	269382	.	-	.	ID=Dca48657.1.exon6;Parent=Dca48657.1
scaffold60	Augustus	exon	270204	271219	.	-	.	ID=Dca48657.1.exon7;Parent=Dca48657.1