Carnation DB

Dca48669.1

Annotation

7-exons
f-1
sp|D7SN79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0061g01020#GO:0005743;GO:0033615#0F1P1C
AT1G08220.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | chr1:2581574-2583288 REVERSE LENGTH=274
Repeat List (scaffold600)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48669.1	1	172	227	41.4	172	54	2e-47
Target_name	Start	End	Length	Cov(%)
sp\|D7SN79_VITVI	1	176	272	64.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48669.1	36	172	227	31.71	137	51	6e-38
Target_name	Start	End	Length	Cov(%)
AT1G08220.1	37	178	274	51.82

seqname	source	feature	start	end	score	strand	frame	group
scaffold600	Augustus	mRNA	56710	61081	.	-	.	ID=Dca48669.1;Parent=Dca48669
scaffold600	Augustus	exon	56710	56802	.	-	.	ID=Dca48669.1.exon1;Parent=Dca48669.1
scaffold600	Augustus	exon	57193	57270	.	-	.	ID=Dca48669.1.exon2;Parent=Dca48669.1
scaffold600	Augustus	exon	57856	57927	.	-	.	ID=Dca48669.1.exon3;Parent=Dca48669.1
scaffold600	Augustus	exon	58800	58988	.	-	.	ID=Dca48669.1.exon4;Parent=Dca48669.1
scaffold600	Augustus	exon	60545	60608	.	-	.	ID=Dca48669.1.exon5;Parent=Dca48669.1
scaffold600	Augustus	exon	60776	60816	.	-	.	ID=Dca48669.1.exon6;Parent=Dca48669.1
scaffold600	Augustus	exon	60935	61081	.	-	.	ID=Dca48669.1.exon7;Parent=Dca48669.1