Carnation DB

Dca48734.1

Annotation

5-exons
f-1
sp|B9H9H5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_801796#GO:0008380#0F1P0C
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17304319-17306855 REVERSE LENGTH=554
Repeat List (scaffold602)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48734.1	95	616	616	62.98	522	74	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H9H5_POPTR	25	548	548	95.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48734.1	119	616	616	53.57	498	66	0
Target_name	Start	End	Length	Cov(%)
AT2G41500.1	60	553	554	89.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold602	Augustus	mRNA	71054	74825	.	-	.	ID=Dca48734.1;Parent=Dca48734
scaffold602	Augustus	exon	71054	71148	.	-	.	ID=Dca48734.1.exon1;Parent=Dca48734.1
scaffold602	Augustus	exon	72044	72125	.	-	.	ID=Dca48734.1.exon2;Parent=Dca48734.1
scaffold602	Augustus	exon	72216	72413	.	-	.	ID=Dca48734.1.exon3;Parent=Dca48734.1
scaffold602	Augustus	exon	72497	72950	.	-	.	ID=Dca48734.1.exon4;Parent=Dca48734.1
scaffold602	Augustus	exon	73804	74825	.	-	.	ID=Dca48734.1.exon5;Parent=Dca48734.1