Carnation DB

Dca48745.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold6021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48745.1	72	1187	1524	45.99	1116	57	0
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	277	1521	1553	80.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48745.1	147	1186	1524	25.06	1040	34	5e-158
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	414	1475	1539	69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6021	Augustus	mRNA	9696	18618	.	-	.	ID=Dca48745.1;Parent=Dca48745
scaffold6021	Augustus	exon	9696	10702	.	-	.	ID=Dca48745.1.exon1;Parent=Dca48745.1
scaffold6021	Augustus	exon	14800	15440	.	-	.	ID=Dca48745.1.exon2;Parent=Dca48745.1
scaffold6021	Augustus	exon	15503	16611	.	-	.	ID=Dca48745.1.exon3;Parent=Dca48745.1
scaffold6021	Augustus	exon	16693	17292	.	-	.	ID=Dca48745.1.exon4;Parent=Dca48745.1
scaffold6021	Augustus	exon	17401	18618	.	-	.	ID=Dca48745.1.exon5;Parent=Dca48745.1