Dca4882.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold11855)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4882.1 |
1 |
148 |
667 |
9.74 |
148 |
44 |
6e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
508 |
1717 |
7.86 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4882.1 |
197 |
315 |
667 |
5.99 |
119 |
32 |
7e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
64 |
189 |
192 |
65.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11855 |
Augustus |
mRNA |
816 |
7378 |
. |
- |
. |
ID=Dca4882.1;Parent=Dca4882 |
| scaffold11855 |
Augustus |
exon |
816 |
1128 |
. |
- |
. |
ID=Dca4882.1.exon1;Parent=Dca4882.1 |
| scaffold11855 |
Augustus |
exon |
1649 |
1703 |
. |
- |
. |
ID=Dca4882.1.exon2;Parent=Dca4882.1 |
| scaffold11855 |
Augustus |
exon |
2817 |
4008 |
. |
- |
. |
ID=Dca4882.1.exon3;Parent=Dca4882.1 |
| scaffold11855 |
Augustus |
exon |
6935 |
7378 |
. |
- |
. |
ID=Dca4882.1.exon4;Parent=Dca4882.1 |
