Dca48833.1
Annotation
- 4-exons
- f-1
- sp|B9N5P9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_672191#unknown#0F0P0C
- Repeat List (scaffold6047)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca48833.1 |
63 |
173 |
173 |
46.24 |
111 |
71 |
4e-19
|
Target_name |
Start |
End |
Length |
Cov(%) |
sp|B9N5P9_POPTR |
45 |
157 |
159 |
71.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca48833.1 |
76 |
173 |
173 |
39.88 |
98 |
69 |
5e-13
|
Target_name |
Start |
End |
Length |
Cov(%) |
AT1G56200.1 |
55 |
152 |
154 |
63.63 |
Coding region
seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
scaffold6047 |
Augus-PASA |
mRNA |
13420 |
15814 |
. |
- |
. |
ID=Dca48833.1;Parent=Dca48833 |
scaffold6047 |
Augus-PASA |
exon |
13420 |
13610 |
. |
- |
. |
ID=Dca48833.1.exon1;Parent=Dca48833.1 |
scaffold6047 |
Augus-PASA |
exon |
14038 |
14110 |
. |
- |
. |
ID=Dca48833.1.exon2;Parent=Dca48833.1 |
scaffold6047 |
Augus-PASA |
exon |
14892 |
15091 |
. |
- |
. |
ID=Dca48833.1.exon3;Parent=Dca48833.1 |
scaffold6047 |
Augustus |
exon |
15757 |
15814 |
. |
- |
. |
ID=Dca48833.1.exon4;Parent=Dca48833.1 |