Carnation DB

Dca48878.1

Annotation

10-exons
f-1
sp|D7TA65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g00400#unknown#0F0P0C
AT5G17370.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:5721801-5724719 REVERSE LENGTH=529
Repeat List (scaffold606)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48878.1	22	395	396	47.47	374	50	8e-101
Target_name	Start	End	Length	Cov(%)
sp\|D7TA65_VITVI	136	509	509	73.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48878.1	68	393	396	39.14	326	45	3e-69
Target_name	Start	End	Length	Cov(%)
AT5G17370.1	203	528	529	61.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold606	Augustus	mRNA	43218	46618	.	-	.	ID=Dca48878.1;Parent=Dca48878
scaffold606	Augustus	exon	43218	43336	.	-	.	ID=Dca48878.1.exon1;Parent=Dca48878.1
scaffold606	Augustus	exon	43415	43525	.	-	.	ID=Dca48878.1.exon2;Parent=Dca48878.1
scaffold606	Augustus	exon	43642	43762	.	-	.	ID=Dca48878.1.exon3;Parent=Dca48878.1
scaffold606	Augustus	exon	43880	43937	.	-	.	ID=Dca48878.1.exon4;Parent=Dca48878.1
scaffold606	Augustus	exon	44031	44086	.	-	.	ID=Dca48878.1.exon5;Parent=Dca48878.1
scaffold606	Augustus	exon	44315	44470	.	-	.	ID=Dca48878.1.exon6;Parent=Dca48878.1
scaffold606	Augustus	exon	44845	44945	.	-	.	ID=Dca48878.1.exon7;Parent=Dca48878.1
scaffold606	Augustus	exon	45126	45301	.	-	.	ID=Dca48878.1.exon8;Parent=Dca48878.1
scaffold606	Augustus	exon	45619	45846	.	-	.	ID=Dca48878.1.exon9;Parent=Dca48878.1
scaffold606	Augustus	exon	46554	46618	.	-	.	ID=Dca48878.1.exon10;Parent=Dca48878.1
scaffold606	Augustus	mRNA	43218	47668	.	-	.	ID=Dca48878.2;Parent=Dca48878
scaffold606	Augustus	exon	43218	43336	.	-	.	ID=Dca48878.2.exon1;Parent=Dca48878.2
scaffold606	Augustus	exon	43415	43525	.	-	.	ID=Dca48878.2.exon2;Parent=Dca48878.2
scaffold606	Augustus	exon	43642	43762	.	-	.	ID=Dca48878.2.exon3;Parent=Dca48878.2
scaffold606	Augustus	exon	43880	43937	.	-	.	ID=Dca48878.2.exon4;Parent=Dca48878.2
scaffold606	Augustus	exon	44031	44086	.	-	.	ID=Dca48878.2.exon5;Parent=Dca48878.2
scaffold606	Augustus	exon	44315	44470	.	-	.	ID=Dca48878.2.exon6;Parent=Dca48878.2
scaffold606	Augustus	exon	44845	44945	.	-	.	ID=Dca48878.2.exon7;Parent=Dca48878.2
scaffold606	Augustus	exon	45126	45301	.	-	.	ID=Dca48878.2.exon8;Parent=Dca48878.2
scaffold606	Augustus	exon	45619	45846	.	-	.	ID=Dca48878.2.exon9;Parent=Dca48878.2
scaffold606	Augustus	exon	45947	46077	.	-	.	ID=Dca48878.2.exon10;Parent=Dca48878.2
scaffold606	Augustus	exon	46554	46688	.	-	.	ID=Dca48878.2.exon11;Parent=Dca48878.2
scaffold606	Augustus	exon	47418	47539	.	-	.	ID=Dca48878.2.exon12;Parent=Dca48878.2
scaffold606	Augustus	exon	47659	47668	.	-	.	ID=Dca48878.2.exon13;Parent=Dca48878.2