Carnation DB

Dca48953.1

Annotation

5-exons
f-1
sp|B9GNJ0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_756237#GO:0004592;GO:0015940#1F1P0C
sp|B9S544_RICCO#Pantoate-beta-alanine ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1721250#GO:0004592;GO:0015940#1F1P0C
Repeat List (scaffold6077)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48953.1	45	147	154	42.85	103	61	3e-32
Target_name	Start	End	Length	Cov(%)
sp\|B9GNJ0_POPTR	200	308	319	34.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48953.1	45	146	154	36.36	102	52	3e-25
Target_name	Start	End	Length	Cov(%)
AT5G48840.1	189	296	310	34.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6077	Augustus	mRNA	20048	23090	.	+	.	ID=Dca48953.1;Parent=Dca48953
scaffold6077	Augustus	exon	20048	20067	.	+	.	ID=Dca48953.1.exon1;Parent=Dca48953.1
scaffold6077	Augustus	exon	22073	22184	.	+	.	ID=Dca48953.1.exon2;Parent=Dca48953.1
scaffold6077	Augustus	exon	22559	22668	.	+	.	ID=Dca48953.1.exon3;Parent=Dca48953.1
scaffold6077	Augustus	exon	22754	22871	.	+	.	ID=Dca48953.1.exon4;Parent=Dca48953.1
scaffold6077	Augustus	exon	22986	23090	.	+	.	ID=Dca48953.1.exon5;Parent=Dca48953.1