Carnation DB

Dca48962.1

Annotation

8-exons
f-1
sp|B9HBY1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_416267#GO:0031072;GO:0051082#2F0P0C
AT5G06130.2 | Symbols: | chaperone protein dnaJ-related | chr5:1853754-1855763 REVERSE LENGTH=315
Repeat List (scaffold608)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48962.1	82	329	329	59.57	248	80	5e-116
Target_name	Start	End	Length	Cov(%)
sp\|B9HBY1_POPTR	1	248	248	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48962.1	82	329	329	56.23	248	75	1e-106
Target_name	Start	End	Length	Cov(%)
AT5G06130.2	68	315	315	78.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold608	Augus-PASA	mRNA	7766	12984	.	+	.	ID=Dca48962.1;Parent=Dca48962
scaffold608	Augus-PASA	exon	7766	7995	.	+	.	ID=Dca48962.1.exon1;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	8554	8686	.	+	.	ID=Dca48962.1.exon2;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	8768	8887	.	+	.	ID=Dca48962.1.exon3;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	9337	9423	.	+	.	ID=Dca48962.1.exon4;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	10770	10846	.	+	.	ID=Dca48962.1.exon5;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	11039	11166	.	+	.	ID=Dca48962.1.exon6;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	12020	12156	.	+	.	ID=Dca48962.1.exon7;Parent=Dca48962.1
scaffold608	Augus-PASA	exon	12907	12984	.	+	.	ID=Dca48962.1.exon8;Parent=Dca48962.1