Carnation DB

Dca48970.1

Annotation

5-exons
f-1
sp|B9HK05_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803047#unknown#0F0P0C
sp|B9RJ00_RICCO#Katanin P80 subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1753460#GO:0004402#1F0P0C
Repeat List (scaffold608)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48970.1	4	157	159	64.77	154	67	2e-57
Target_name	Start	End	Length	Cov(%)
sp\|B9HK05_POPTR	648	801	802	19.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48970.1	12	157	159	54.71	146	60	4e-47
Target_name	Start	End	Length	Cov(%)
Os04t0677700-00	743	889	891	16.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold608	Augustus	mRNA	67692	70369	.	-	.	ID=Dca48970.1;Parent=Dca48970
scaffold608	Augustus	exon	67692	67758	.	-	.	ID=Dca48970.1.exon1;Parent=Dca48970.1
scaffold608	Augustus	exon	67852	67920	.	-	.	ID=Dca48970.1.exon2;Parent=Dca48970.1
scaffold608	Augustus	exon	69008	69124	.	-	.	ID=Dca48970.1.exon3;Parent=Dca48970.1
scaffold608	Augustus	exon	70031	70143	.	-	.	ID=Dca48970.1.exon4;Parent=Dca48970.1
scaffold608	Augustus	exon	70256	70369	.	-	.	ID=Dca48970.1.exon5;Parent=Dca48970.1