Carnation DB

Dca49067.1

Annotation

8-exons
f-1
sp|D7TUW5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0030g00730#GO:0005198#1F0P0C
AT1G08820.1 | Symbols: VAP27-2 | vamp/synaptobrevin-associated protein 27-2 | chr1:2821810-2824412 REVERSE LENGTH=386
Repeat List (scaffold61)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49067.1	2	316	317	49.21	315	47	4e-72
Target_name	Start	End	Length	Cov(%)
sp\|D7TUW5_VITVI	3	335	336	99.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49067.1	5	313	317	44.47	309	37	7e-53
Target_name	Start	End	Length	Cov(%)
AT1G08820.1	6	382	386	97.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold61	Augus-PASA	mRNA	111066	114622	.	+	.	ID=Dca49067.1;Parent=Dca49067
scaffold61	Augus-PASA	exon	111066	111111	.	+	.	ID=Dca49067.1.exon1;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	111277	111347	.	+	.	ID=Dca49067.1.exon2;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	111451	111532	.	+	.	ID=Dca49067.1.exon3;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	112929	113044	.	+	.	ID=Dca49067.1.exon4;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	113183	113296	.	+	.	ID=Dca49067.1.exon5;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	113546	113878	.	+	.	ID=Dca49067.1.exon6;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	114034	114111	.	+	.	ID=Dca49067.1.exon7;Parent=Dca49067.1
scaffold61	Augus-PASA	exon	114509	114622	.	+	.	ID=Dca49067.1.exon8;Parent=Dca49067.1