Carnation DB

Dca4910.1

Annotation

7-exons
f-1
sp|D7U263_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00130#GO:0005783;GO:0016021;GO:0016758#1F0P2C
AT2G47760.1 | Symbols: ALG3, AtALG3 | asparagine-linked glycosylation 3 | chr2:19565672-19568221 REVERSE LENGTH=438
Repeat List (scaffold11870)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4910.1	2	182	215	58.6	181	68	4e-65
Target_name	Start	End	Length	Cov(%)
sp\|D7U263_VITVI	221	405	437	42.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4910.1	2	172	215	47.44	171	59	2e-55
Target_name	Start	End	Length	Cov(%)
AT2G47760.1	227	395	438	38.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11870	Augustus	mRNA	3852	6956	.	-	.	ID=Dca4910.1;Parent=Dca4910
scaffold11870	Augustus	exon	3852	3992	.	-	.	ID=Dca4910.1.exon1;Parent=Dca4910.1
scaffold11870	Augustus	exon	5452	5488	.	-	.	ID=Dca4910.1.exon2;Parent=Dca4910.1
scaffold11870	Augustus	exon	5578	5634	.	-	.	ID=Dca4910.1.exon3;Parent=Dca4910.1
scaffold11870	Augustus	exon	5708	5786	.	-	.	ID=Dca4910.1.exon4;Parent=Dca4910.1
scaffold11870	Augustus	exon	6056	6171	.	-	.	ID=Dca4910.1.exon5;Parent=Dca4910.1
scaffold11870	Augustus	exon	6461	6577	.	-	.	ID=Dca4910.1.exon6;Parent=Dca4910.1
scaffold11870	Augustus	exon	6856	6956	.	-	.	ID=Dca4910.1.exon7;Parent=Dca4910.1