Carnation DB

Dca49115.1

Annotation

5-exons
f-1
sp|B9S053_RICCO#ATP synthase alpha subunit mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1298470#GO:0005524;GO:0016787;GO:0008270#3F0P0C
Repeat List (scaffold610)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49115.1	1	60	61	57.37	60	59	3e-06
Target_name	Start	End	Length	Cov(%)
sp\|C6TG50_SOYBN	10	68	100	59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49115.1	1	249	252	74.6	249	76	2e-97
Target_name	Start	End	Length	Cov(%)
AT1G14510.1	1	248	252	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold610	Augus-PASA	mRNA	104221	108086	.	+	.	ID=Dca49115.1;Parent=Dca49115
scaffold610	Augus-PASA	exon	104221	104317	.	+	.	ID=Dca49115.1.exon1;Parent=Dca49115.1
scaffold610	Augus-PASA	exon	104465	104497	.	+	.	ID=Dca49115.1.exon2;Parent=Dca49115.1
scaffold610	Augus-PASA	exon	105816	106044	.	+	.	ID=Dca49115.1.exon3;Parent=Dca49115.1
scaffold610	Augus-PASA	exon	107572	107698	.	+	.	ID=Dca49115.1.exon4;Parent=Dca49115.1
scaffold610	Augus-PASA	exon	107814	108086	.	+	.	ID=Dca49115.1.exon5;Parent=Dca49115.1