Dca49138.1
Annotation
- 2-exons
- f-1
- sp|Q9LVQ2_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold611)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49138.1 |
427 |
523 |
607 |
8.07 |
97 |
51 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ2_ARATH |
701 |
797 |
1491 |
6.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49138.1 |
39 |
234 |
607 |
10.37 |
196 |
32 |
7e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
41 |
237 |
237 |
83.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold611 |
Augustus |
mRNA |
4045 |
6789 |
. |
+ |
. |
ID=Dca49138.1;Parent=Dca49138 |
| scaffold611 |
Augustus |
exon |
4045 |
5320 |
. |
+ |
. |
ID=Dca49138.1.exon1;Parent=Dca49138.1 |
| scaffold611 |
Augustus |
exon |
6242 |
6789 |
. |
+ |
. |
ID=Dca49138.1.exon2;Parent=Dca49138.1 |
