Carnation DB

Dca49169.1

Annotation

7-exons
f-1
sp|B9RZN4_RICCO#Protein translocase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1000020#GO:0016021#0F0P1C
Repeat List (scaffold611)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49169.1	1	173	173	78.03	173	75	1e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9RZN4_RICCO	1	181	181	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49169.1	8	173	173	67.63	166	68	5e-61
Target_name	Start	End	Length	Cov(%)
AT4G16160.2	7	178	178	96.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold611	Augustus	mRNA	265534	267547	.	+	.	ID=Dca49169.1;Parent=Dca49169
scaffold611	Augustus	exon	265534	265662	.	+	.	ID=Dca49169.1.exon1;Parent=Dca49169.1
scaffold611	Augustus	exon	266615	266666	.	+	.	ID=Dca49169.1.exon2;Parent=Dca49169.1
scaffold611	Augustus	exon	266761	266823	.	+	.	ID=Dca49169.1.exon3;Parent=Dca49169.1
scaffold611	Augustus	exon	266924	266955	.	+	.	ID=Dca49169.1.exon4;Parent=Dca49169.1
scaffold611	Augustus	exon	267045	267078	.	+	.	ID=Dca49169.1.exon5;Parent=Dca49169.1
scaffold611	Augustus	exon	267168	267235	.	+	.	ID=Dca49169.1.exon6;Parent=Dca49169.1
scaffold611	Augustus	exon	267404	267547	.	+	.	ID=Dca49169.1.exon7;Parent=Dca49169.1