Dca49183.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6113)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49183.1 |
277 |
375 |
387 |
15.24 |
99 |
60 |
8e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1160 |
1258 |
1313 |
7.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49183.1 |
272 |
361 |
387 |
9.04 |
90 |
39 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
442 |
529 |
1262 |
6.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6113 |
Augustus |
mRNA |
25326 |
28571 |
. |
+ |
. |
ID=Dca49183.1;Parent=Dca49183 |
| scaffold6113 |
Augustus |
exon |
25326 |
25562 |
. |
+ |
. |
ID=Dca49183.1.exon1;Parent=Dca49183.1 |
| scaffold6113 |
Augustus |
exon |
25664 |
26255 |
. |
+ |
. |
ID=Dca49183.1.exon2;Parent=Dca49183.1 |
| scaffold6113 |
Augustus |
exon |
28237 |
28571 |
. |
+ |
. |
ID=Dca49183.1.exon3;Parent=Dca49183.1 |
