Carnation DB

Dca4920.1

Annotation

6-exons
f-1
sp|D7TLM4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02370#GO:0016020#0F0P1C
AT2G39805.2 | Symbols: | Integral membrane Yip1 family protein | chr2:16610216-16612353 REVERSE LENGTH=276
Repeat List (scaffold1188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4920.1	3	265	266	65.78	263	66	2e-97
Target_name	Start	End	Length	Cov(%)
sp\|D7TLM4_VITVI	2	268	269	99.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4920.1	3	265	266	62.4	263	61	2e-91
Target_name	Start	End	Length	Cov(%)
AT2G39805.2	2	275	276	99.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1188	Augus-PASA	mRNA	37403	41484	.	-	.	ID=Dca4920.1;Parent=Dca4920
scaffold1188	Augus-PASA	exon	37403	37594	.	-	.	ID=Dca4920.1.exon1;Parent=Dca4920.1
scaffold1188	Augus-PASA	exon	38243	38501	.	-	.	ID=Dca4920.1.exon2;Parent=Dca4920.1
scaffold1188	Augus-PASA	exon	39401	39566	.	-	.	ID=Dca4920.1.exon3;Parent=Dca4920.1
scaffold1188	Augus-PASA	exon	40594	40677	.	-	.	ID=Dca4920.1.exon4;Parent=Dca4920.1
scaffold1188	Augus-PASA	exon	40778	40820	.	-	.	ID=Dca4920.1.exon5;Parent=Dca4920.1
scaffold1188	Augus-PASA	exon	41428	41484	.	-	.	ID=Dca4920.1.exon6;Parent=Dca4920.1