Carnation DB

Dca49268.1

Annotation

10-exons
f-1
sp|B9I4U6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_891844#unknown#0F0P0C
AT3G58130.1 | Symbols: | N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein | chr3:21527946-21529654 FORWARD LENGTH=257
Repeat List (scaffold6136)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49268.1	6	224	225	63.55	219	66	6e-87
Target_name	Start	End	Length	Cov(%)
sp\|B9I4U6_POPTR	42	260	265	82.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49268.1	3	224	225	60	222	61	4e-78
Target_name	Start	End	Length	Cov(%)
AT3G58130.1	37	256	257	85.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6136	Augustus	mRNA	15177	17962	.	+	.	ID=Dca49268.1;Parent=Dca49268
scaffold6136	Augustus	exon	15177	15183	.	+	.	ID=Dca49268.1.exon1;Parent=Dca49268.1
scaffold6136	Augustus	exon	15920	15980	.	+	.	ID=Dca49268.1.exon2;Parent=Dca49268.1
scaffold6136	Augustus	exon	16303	16373	.	+	.	ID=Dca49268.1.exon3;Parent=Dca49268.1
scaffold6136	Augustus	exon	16500	16564	.	+	.	ID=Dca49268.1.exon4;Parent=Dca49268.1
scaffold6136	Augustus	exon	16941	16985	.	+	.	ID=Dca49268.1.exon5;Parent=Dca49268.1
scaffold6136	Augustus	exon	17079	17159	.	+	.	ID=Dca49268.1.exon6;Parent=Dca49268.1
scaffold6136	Augustus	exon	17281	17348	.	+	.	ID=Dca49268.1.exon7;Parent=Dca49268.1
scaffold6136	Augustus	exon	17501	17549	.	+	.	ID=Dca49268.1.exon8;Parent=Dca49268.1
scaffold6136	Augustus	exon	17640	17800	.	+	.	ID=Dca49268.1.exon9;Parent=Dca49268.1
scaffold6136	Augustus	exon	17893	17962	.	+	.	ID=Dca49268.1.exon10;Parent=Dca49268.1