Carnation DB

Dca4927.1

Annotation

5-exons
f-1
sp|F6HZQ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g04190#GO:0005694;GO:0005634;GO:0018024;GO:0008270#2F0P2C
Os02t0621100-01 Similar to Su(VAR)3-9-related protein 4.
Repeat List (scaffold1188)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4927.1	2	314	315	61.9	313	62	8e-117
Target_name	Start	End	Length	Cov(%)
sp\|F6HZQ2_VITVI	525	842	848	37.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4927.1	19	312	315	57.46	294	59	7e-106
Target_name	Start	End	Length	Cov(%)
Os02t0621100-01	429	735	742	41.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1188	Augustus	mRNA	91331	93447	.	-	.	ID=Dca4927.1;Parent=Dca4927
scaffold1188	Augustus	exon	91331	91438	.	-	.	ID=Dca4927.1.exon1;Parent=Dca4927.1
scaffold1188	Augustus	exon	92191	92241	.	-	.	ID=Dca4927.1.exon2;Parent=Dca4927.1
scaffold1188	Augustus	exon	92387	92453	.	-	.	ID=Dca4927.1.exon3;Parent=Dca4927.1
scaffold1188	Augustus	exon	92586	92845	.	-	.	ID=Dca4927.1.exon4;Parent=Dca4927.1
scaffold1188	Augustus	exon	92986	93447	.	-	.	ID=Dca4927.1.exon5;Parent=Dca4927.1