Dca49297.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6143)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49297.1 |
1 |
452 |
453 |
52.53 |
452 |
48 |
8e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
267 |
751 |
1313 |
36.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49297.1 |
122 |
453 |
453 |
25.6 |
332 |
35 |
7e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
389 |
723 |
1428 |
23.45 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6143 |
Augustus |
mRNA |
15702 |
17192 |
. |
+ |
. |
ID=Dca49297.1;Parent=Dca49297 |
| scaffold6143 |
Augustus |
exon |
15702 |
16047 |
. |
+ |
. |
ID=Dca49297.1.exon1;Parent=Dca49297.1 |
| scaffold6143 |
Augustus |
exon |
16177 |
17192 |
. |
+ |
. |
ID=Dca49297.1.exon2;Parent=Dca49297.1 |
