Carnation DB

Dca49411.1

Annotation

20-exons
f-3
sp|B9HNH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557695#GO:0005096;GO:0007165#1F1P0C
Os07t0658300-01 RhoGAP domain containing protein.
Repeat List (scaffold6175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49411.1	1	831	831	80.5	831	79	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HNH0_POPTR	29	872	872	96.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49411.1	1	831	831	70.87	831	69	0
Target_name	Start	End	Length	Cov(%)
AT5G19390.1	32	870	870	96.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6175	Augustus	mRNA	26148	34643	.	-	.	ID=Dca49411.1;Parent=Dca49411
scaffold6175	Augustus	exon	26148	26333	.	-	.	ID=Dca49411.1.exon1;Parent=Dca49411.1
scaffold6175	Augustus	exon	26489	26692	.	-	.	ID=Dca49411.1.exon2;Parent=Dca49411.1
scaffold6175	Augustus	exon	26929	26998	.	-	.	ID=Dca49411.1.exon3;Parent=Dca49411.1
scaffold6175	Augustus	exon	27896	28032	.	-	.	ID=Dca49411.1.exon4;Parent=Dca49411.1
scaffold6175	Augustus	exon	28128	28241	.	-	.	ID=Dca49411.1.exon5;Parent=Dca49411.1
scaffold6175	Augustus	exon	28693	28776	.	-	.	ID=Dca49411.1.exon6;Parent=Dca49411.1
scaffold6175	Augustus	exon	28871	28931	.	-	.	ID=Dca49411.1.exon7;Parent=Dca49411.1
scaffold6175	Augustus	exon	29129	29178	.	-	.	ID=Dca49411.1.exon8;Parent=Dca49411.1
scaffold6175	Augustus	exon	29783	30124	.	-	.	ID=Dca49411.1.exon9;Parent=Dca49411.1
scaffold6175	Augustus	exon	30361	30582	.	-	.	ID=Dca49411.1.exon10;Parent=Dca49411.1
scaffold6175	Augustus	exon	31137	31380	.	-	.	ID=Dca49411.1.exon11;Parent=Dca49411.1
scaffold6175	Augustus	exon	32330	32417	.	-	.	ID=Dca49411.1.exon12;Parent=Dca49411.1
scaffold6175	Augustus	exon	32902	32971	.	-	.	ID=Dca49411.1.exon13;Parent=Dca49411.1
scaffold6175	Augustus	exon	33056	33111	.	-	.	ID=Dca49411.1.exon14;Parent=Dca49411.1
scaffold6175	Augustus	exon	33228	33305	.	-	.	ID=Dca49411.1.exon15;Parent=Dca49411.1
scaffold6175	Augustus	exon	33634	33753	.	-	.	ID=Dca49411.1.exon16;Parent=Dca49411.1
scaffold6175	Augustus	exon	33895	34039	.	-	.	ID=Dca49411.1.exon17;Parent=Dca49411.1
scaffold6175	Augustus	exon	34196	34274	.	-	.	ID=Dca49411.1.exon18;Parent=Dca49411.1
scaffold6175	Augustus	exon	34355	34425	.	-	.	ID=Dca49411.1.exon19;Parent=Dca49411.1
scaffold6175	Augustus	exon	34567	34643	.	-	.	ID=Dca49411.1.exon20;Parent=Dca49411.1