Carnation DB

Dca49444.1

Annotation

9-exons
f-1
sp|F6GSS7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g01850#GO:0003723#1F0P0C
sp|F4JF21_ARATH#CONSTANS interacting protein 5-like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=PDE312#GO:0003723#1F0P0C
Repeat List (scaffold6184)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49444.1	1	419	419	74.7	419	66	7e-173
Target_name	Start	End	Length	Cov(%)
sp\|F6GSS7_VITVI	1	479	674	71.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49444.1	35	397	419	50.35	363	50	7e-106
Target_name	Start	End	Length	Cov(%)
Os01t0901900-01	31	448	469	89.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6184	Augustus	mRNA	386	6005	.	-	.	ID=Dca49444.1;Parent=Dca49444
scaffold6184	Augustus	exon	386	436	.	-	.	ID=Dca49444.1.exon1;Parent=Dca49444.1
scaffold6184	Augustus	exon	532	708	.	-	.	ID=Dca49444.1.exon2;Parent=Dca49444.1
scaffold6184	Augustus	exon	1489	1581	.	-	.	ID=Dca49444.1.exon3;Parent=Dca49444.1
scaffold6184	Augustus	exon	2417	2483	.	-	.	ID=Dca49444.1.exon4;Parent=Dca49444.1
scaffold6184	Augustus	exon	2581	2654	.	-	.	ID=Dca49444.1.exon5;Parent=Dca49444.1
scaffold6184	Augustus	exon	4225	4254	.	-	.	ID=Dca49444.1.exon6;Parent=Dca49444.1
scaffold6184	Augustus	exon	4346	4405	.	-	.	ID=Dca49444.1.exon7;Parent=Dca49444.1
scaffold6184	Augustus	exon	4665	5016	.	-	.	ID=Dca49444.1.exon8;Parent=Dca49444.1
scaffold6184	Augustus	exon	5653	6005	.	-	.	ID=Dca49444.1.exon9;Parent=Dca49444.1