Carnation DB

Dca49469.1

Annotation

8-exons
f-1
sp|D7THC0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g01740#unknown#0F0P0C
Os03t0266000-01 Ovarian tumour, otubain domain containing protein.
Repeat List (scaffold619)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49469.1	5	231	231	61.9	227	63	2e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7THC0_VITVI	7	226	226	97.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49469.1	7	231	231	57.57	225	60	1e-68
Target_name	Start	End	Length	Cov(%)
Os03t0266000-01	9	224	225	96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold619	Augus-PASA	mRNA	8605	11647	.	+	.	ID=Dca49469.1;Parent=Dca49469
scaffold619	Augus-PASA	exon	8605	8626	.	+	.	ID=Dca49469.1.exon1;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	8704	8869	.	+	.	ID=Dca49469.1.exon2;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	9059	9149	.	+	.	ID=Dca49469.1.exon3;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	9822	9885	.	+	.	ID=Dca49469.1.exon4;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	10116	10221	.	+	.	ID=Dca49469.1.exon5;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	10313	10367	.	+	.	ID=Dca49469.1.exon6;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	10495	10548	.	+	.	ID=Dca49469.1.exon7;Parent=Dca49469.1
scaffold619	Augus-PASA	exon	11510	11647	.	+	.	ID=Dca49469.1.exon8;Parent=Dca49469.1