Carnation DB

Dca49471.1

Annotation

8-exons
f-1
sp|F6GTS8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g02970#GO:0015297;GO:0015238#2F0P0C
AT5G52450.1 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Repeat List (scaffold619)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49471.1	1	473	476	70.37	473	70	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GTS8_VITVI	10	488	493	97.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49471.1	17	469	476	63.86	453	68	6e-178
Target_name	Start	End	Length	Cov(%)
AT5G52450.1	19	471	486	93.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold619	Augustus	mRNA	24604	27989	.	+	.	ID=Dca49471.1;Parent=Dca49471
scaffold619	Augustus	exon	24604	24840	.	+	.	ID=Dca49471.1.exon1;Parent=Dca49471.1
scaffold619	Augustus	exon	26188	26732	.	+	.	ID=Dca49471.1.exon2;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	26831	26917	.	+	.	ID=Dca49471.1.exon3;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	27025	27081	.	+	.	ID=Dca49471.1.exon4;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	27194	27432	.	+	.	ID=Dca49471.1.exon5;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	27530	27648	.	+	.	ID=Dca49471.1.exon6;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	27741	27827	.	+	.	ID=Dca49471.1.exon7;Parent=Dca49471.1
scaffold619	Augus-PASA	exon	27930	27989	.	+	.	ID=Dca49471.1.exon8;Parent=Dca49471.1