Carnation DB

Dca49472.1

Annotation

7-exons
f-1
sp|F6GTS8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g02970#GO:0015297;GO:0015238#2F0P0C
Os06t0494400-01 Multi antimicrobial extrusion protein MatE family protein.
Repeat List (scaffold619)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49472.1	1	354	357	70.3	354	60	2e-136
Target_name	Start	End	Length	Cov(%)
sp\|F6GTS8_VITVI	66	488	493	85.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49472.1	1	355	357	61.34	355	52	2e-120
Target_name	Start	End	Length	Cov(%)
Os06t0494400-01	65	488	491	86.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold619	Augustus	mRNA	33824	39988	.	+	.	ID=Dca49472.1;Parent=Dca49472
scaffold619	Augustus	exon	33824	33910	.	+	.	ID=Dca49472.1.exon1;Parent=Dca49472.1
scaffold619	Augustus	exon	38229	38773	.	+	.	ID=Dca49472.1.exon2;Parent=Dca49472.1
scaffold619	Augustus	exon	38868	38954	.	+	.	ID=Dca49472.1.exon3;Parent=Dca49472.1
scaffold619	Augustus	exon	39213	39301	.	+	.	ID=Dca49472.1.exon4;Parent=Dca49472.1
scaffold619	Augustus	exon	39534	39652	.	+	.	ID=Dca49472.1.exon5;Parent=Dca49472.1
scaffold619	Augustus	exon	39734	39820	.	+	.	ID=Dca49472.1.exon6;Parent=Dca49472.1
scaffold619	Augustus	exon	39929	39988	.	+	.	ID=Dca49472.1.exon7;Parent=Dca49472.1