Carnation DB

Dca49489.1

Annotation

16-exons
f-1
sp|D7TBH5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g03220#GO:0003968#1F0P0C
sp|D7L6F2_ARALL#RNA-dependent RNA polymerase family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_480480#GO:0003968#1F0P0C
Repeat List (scaffold6194)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49489.1	3	793	794	51.51	791	49	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TBH5_VITVI	99	928	929	89.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49489.1	6	793	794	47.98	788	44	2e-173
Target_name	Start	End	Length	Cov(%)
AT2G19910.1	140	991	992	85.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6194	Augustus	mRNA	8899	13535	.	+	.	ID=Dca49489.1;Parent=Dca49489
scaffold6194	Augustus	exon	8899	8975	.	+	.	ID=Dca49489.1.exon1;Parent=Dca49489.1
scaffold6194	Augustus	exon	9093	9231	.	+	.	ID=Dca49489.1.exon2;Parent=Dca49489.1
scaffold6194	Augustus	exon	9326	9403	.	+	.	ID=Dca49489.1.exon3;Parent=Dca49489.1
scaffold6194	Augustus	exon	9503	9635	.	+	.	ID=Dca49489.1.exon4;Parent=Dca49489.1
scaffold6194	Augustus	exon	9866	10032	.	+	.	ID=Dca49489.1.exon5;Parent=Dca49489.1
scaffold6194	Augustus	exon	10344	10487	.	+	.	ID=Dca49489.1.exon6;Parent=Dca49489.1
scaffold6194	Augustus	exon	10781	10852	.	+	.	ID=Dca49489.1.exon7;Parent=Dca49489.1
scaffold6194	Augustus	exon	11007	11113	.	+	.	ID=Dca49489.1.exon8;Parent=Dca49489.1
scaffold6194	Augustus	exon	11257	11405	.	+	.	ID=Dca49489.1.exon9;Parent=Dca49489.1
scaffold6194	Augustus	exon	11496	11721	.	+	.	ID=Dca49489.1.exon10;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	11912	12137	.	+	.	ID=Dca49489.1.exon11;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	12254	12399	.	+	.	ID=Dca49489.1.exon12;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	12490	12661	.	+	.	ID=Dca49489.1.exon13;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	12811	12958	.	+	.	ID=Dca49489.1.exon14;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	13048	13208	.	+	.	ID=Dca49489.1.exon15;Parent=Dca49489.1
scaffold6194	Augus-PASA	exon	13296	13535	.	+	.	ID=Dca49489.1.exon16;Parent=Dca49489.1