Carnation DB

Dca4952.1

Annotation

6-exons
f-1
sp|D7TD15_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0057g00310#unknown#0F0P0C
Os09t0442400-01 t-snare domain containing protein.
Repeat List (scaffold11892)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4952.1	35	580	582	47.76	546	51	1e-152
Target_name	Start	End	Length	Cov(%)
sp\|D7TD15_VITVI	1	544	547	99.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4952.1	27	578	582	41.92	552	43	1e-129
Target_name	Start	End	Length	Cov(%)
Os09t0442400-01	55	631	640	90.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11892	Augustus	mRNA	9855	12025	.	-	.	ID=Dca4952.1;Parent=Dca4952
scaffold11892	Augustus	exon	9855	10131	.	-	.	ID=Dca4952.1.exon1;Parent=Dca4952.1
scaffold11892	Augustus	exon	10229	10376	.	-	.	ID=Dca4952.1.exon2;Parent=Dca4952.1
scaffold11892	Augustus	exon	10460	10646	.	-	.	ID=Dca4952.1.exon3;Parent=Dca4952.1
scaffold11892	Augustus	exon	10717	10843	.	-	.	ID=Dca4952.1.exon4;Parent=Dca4952.1
scaffold11892	Augustus	exon	10935	11522	.	-	.	ID=Dca4952.1.exon5;Parent=Dca4952.1
scaffold11892	Augustus	exon	11604	12025	.	-	.	ID=Dca4952.1.exon6;Parent=Dca4952.1