Carnation DB

Dca49525.1

Annotation

9-exons
f-1
sp|B9HS29_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557409#GO:0008270#1F0P0C
Os06t0639100-02 Similar to protein binding / zinc ion binding.
Repeat List (scaffold62)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49525.1	58	1149	1154	72.79	1092	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HS29_POPTR	10	1105	1110	98.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49525.1	92	1149	1154	69.15	1058	76	0
Target_name	Start	End	Length	Cov(%)
AT4G34100.1	48	1103	1108	95.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold62	Augustus	mRNA	171395	177226	.	+	.	ID=Dca49525.1;Parent=Dca49525
scaffold62	Augustus	exon	171395	171859	.	+	.	ID=Dca49525.1.exon1;Parent=Dca49525.1
scaffold62	Augustus	exon	172445	173137	.	+	.	ID=Dca49525.1.exon2;Parent=Dca49525.1
scaffold62	Augustus	exon	174079	174843	.	+	.	ID=Dca49525.1.exon3;Parent=Dca49525.1
scaffold62	Augustus	exon	174926	175137	.	+	.	ID=Dca49525.1.exon4;Parent=Dca49525.1
scaffold62	Augustus	exon	175232	175603	.	+	.	ID=Dca49525.1.exon5;Parent=Dca49525.1
scaffold62	Augus-PASA	exon	175738	175898	.	+	.	ID=Dca49525.1.exon6;Parent=Dca49525.1
scaffold62	Augus-PASA	exon	175983	176146	.	+	.	ID=Dca49525.1.exon7;Parent=Dca49525.1
scaffold62	Augus-PASA	exon	176502	176648	.	+	.	ID=Dca49525.1.exon8;Parent=Dca49525.1
scaffold62	Augus-PASA	exon	176741	177226	.	+	.	ID=Dca49525.1.exon9;Parent=Dca49525.1