Carnation DB

Dca49529.1

Annotation

9-exons
f-1
sp|B9MWE6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836505#GO:0005524;GO:0000287;GO:0004826;GO:0000049;GO:0006432;GO:0008033#4F2P0C
Os12t0533700-01 Phenylalanyl-tRNA synthetase, class IIc, mitochondrial domain containing protein.
Repeat List (scaffold62)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49529.1	1	361	361	85.87	361	86	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MWE6_POPTR	66	426	426	84.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49529.1	4	361	361	81.71	358	83	0
Target_name	Start	End	Length	Cov(%)
Os12t0533700-01	91	448	449	79.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold62	Augustus	mRNA	219247	221753	.	+	.	ID=Dca49529.1;Parent=Dca49529
scaffold62	Augustus	exon	219247	219435	.	+	.	ID=Dca49529.1.exon1;Parent=Dca49529.1
scaffold62	Augustus	exon	219916	220122	.	+	.	ID=Dca49529.1.exon2;Parent=Dca49529.1
scaffold62	Augustus	exon	220211	220328	.	+	.	ID=Dca49529.1.exon3;Parent=Dca49529.1
scaffold62	Augustus	exon	220462	220538	.	+	.	ID=Dca49529.1.exon4;Parent=Dca49529.1
scaffold62	Augustus	exon	220609	220788	.	+	.	ID=Dca49529.1.exon5;Parent=Dca49529.1
scaffold62	Augustus	exon	220876	220920	.	+	.	ID=Dca49529.1.exon6;Parent=Dca49529.1
scaffold62	Augustus	exon	221193	221297	.	+	.	ID=Dca49529.1.exon7;Parent=Dca49529.1
scaffold62	Augustus	exon	221479	221592	.	+	.	ID=Dca49529.1.exon8;Parent=Dca49529.1
scaffold62	Augustus	exon	221703	221753	.	+	.	ID=Dca49529.1.exon9;Parent=Dca49529.1