Carnation DB

Dca49630.1

Annotation

5-exons
f-1
sp|D7TGJ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g02080#unknown#0F0P0C
AT5G49800.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr5:20234771-20236135 REVERSE LENGTH=242
Repeat List (scaffold6216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49630.1	1	199	277	59.2	199	83	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|D7TGJ1_VITVI	1	199	237	83.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49630.1	1	199	277	49.45	199	68	2e-77
Target_name	Start	End	Length	Cov(%)
AT5G49800.1	1	203	242	83.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6216	Augus-PASA	mRNA	21485	24851	.	+	.	ID=Dca49630.1;Parent=Dca49630
scaffold6216	Augus-PASA	exon	21485	21516	.	+	.	ID=Dca49630.1.exon1;Parent=Dca49630.1
scaffold6216	Augus-PASA	exon	21683	21938	.	+	.	ID=Dca49630.1.exon2;Parent=Dca49630.1
scaffold6216	Augustus	exon	22357	22515	.	+	.	ID=Dca49630.1.exon3;Parent=Dca49630.1
scaffold6216	Augustus	exon	22766	22912	.	+	.	ID=Dca49630.1.exon4;Parent=Dca49630.1
scaffold6216	Augustus	exon	24612	24851	.	+	.	ID=Dca49630.1.exon5;Parent=Dca49630.1