Dca49658.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6222)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49658.1 |
29 |
856 |
869 |
46.26 |
828 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
840 |
1501 |
54.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49658.1 |
335 |
850 |
869 |
20.94 |
516 |
35 |
2e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
11 |
523 |
707 |
72.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6222 |
Augustus |
mRNA |
4696 |
8038 |
. |
+ |
. |
ID=Dca49658.1;Parent=Dca49658 |
| scaffold6222 |
Augustus |
exon |
4696 |
5749 |
. |
+ |
. |
ID=Dca49658.1.exon1;Parent=Dca49658.1 |
| scaffold6222 |
Augustus |
exon |
6483 |
8038 |
. |
+ |
. |
ID=Dca49658.1.exon2;Parent=Dca49658.1 |
