Carnation DB

Dca49679.1

Annotation

7-exons
f-1
sp|D7TEV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g00580#GO:0008270#1F0P0C
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:6926497-6929324 FORWARD LENGTH=340
Repeat List (scaffold623)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49679.1	3	329	332	56.32	327	57	5e-87
Target_name	Start	End	Length	Cov(%)
sp\|D7TEV5_VITVI	2	307	308	99.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49679.1	51	329	332	49.69	279	59	3e-80
Target_name	Start	End	Length	Cov(%)
AT3G19910.1	67	335	340	79.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold623	Augus-PASA	mRNA	46339	52295	.	-	.	ID=Dca49679.1;Parent=Dca49679
scaffold623	Augus-PASA	exon	46339	46386	.	-	.	ID=Dca49679.1.exon1;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	47071	47179	.	-	.	ID=Dca49679.1.exon2;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	47257	47378	.	-	.	ID=Dca49679.1.exon3;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	47458	47499	.	-	.	ID=Dca49679.1.exon4;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	49739	49779	.	-	.	ID=Dca49679.1.exon5;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	49881	50256	.	-	.	ID=Dca49679.1.exon6;Parent=Dca49679.1
scaffold623	Augus-PASA	exon	52035	52295	.	-	.	ID=Dca49679.1.exon7;Parent=Dca49679.1