Dca49704.1
Annotation
- 3-exons
- f-1
- sp|F6HI03_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0043g00250#unknown#0F0P0C
- AT2G03820.1 | Symbols: | nonsense-mediated mRNA decay NMD3 family protein | chr2:1165149-1166699 REVERSE LENGTH=516
- Repeat List (scaffold6236)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49704.1 |
94 |
386 |
457 |
26.91 |
293 |
37 |
9e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HI03_VITVI |
216 |
543 |
614 |
53.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49704.1 |
94 |
400 |
457 |
26.25 |
307 |
34 |
1e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G03820.1 |
158 |
500 |
516 |
66.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6236 |
Augustus |
mRNA |
12935 |
17504 |
. |
+ |
. |
ID=Dca49704.1;Parent=Dca49704 |
| scaffold6236 |
Augustus |
exon |
12935 |
13195 |
. |
+ |
. |
ID=Dca49704.1.exon1;Parent=Dca49704.1 |
| scaffold6236 |
Augustus |
exon |
14647 |
15635 |
. |
+ |
. |
ID=Dca49704.1.exon2;Parent=Dca49704.1 |
| scaffold6236 |
Augustus |
exon |
17381 |
17504 |
. |
+ |
. |
ID=Dca49704.1.exon3;Parent=Dca49704.1 |
