Carnation DB

Dca4973.1

Annotation

6-exons
f-1
sp|A5C957_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_018991#unknown#0F0P0C
AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC domain-containing protein | chr3:8048927-8052058 FORWARD LENGTH=695
Repeat List (scaffold119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4973.1	65	451	456	39.03	387	41	3e-71
Target_name	Start	End	Length	Cov(%)
sp\|A5C957_VITVI	200	630	806	53.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4973.1	217	454	456	26.31	238	51	3e-58
Target_name	Start	End	Length	Cov(%)
AT3G22780.1	296	531	695	33.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold119	Augustus	mRNA	92361	96069	.	+	.	ID=Dca4973.1;Parent=Dca4973
scaffold119	Augustus	exon	92361	92852	.	+	.	ID=Dca4973.1.exon1;Parent=Dca4973.1
scaffold119	Augustus	exon	93879	94321	.	+	.	ID=Dca4973.1.exon2;Parent=Dca4973.1
scaffold119	Augustus	exon	94432	94506	.	+	.	ID=Dca4973.1.exon3;Parent=Dca4973.1
scaffold119	Augustus	exon	95260	95437	.	+	.	ID=Dca4973.1.exon4;Parent=Dca4973.1
scaffold119	Augustus	exon	95748	95843	.	+	.	ID=Dca4973.1.exon5;Parent=Dca4973.1
scaffold119	Augustus	exon	95983	96069	.	+	.	ID=Dca4973.1.exon6;Parent=Dca4973.1